EnhancerDB
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  3. rs546491050[chr1:41863418]
Enhancers that have rs546491050[chr1:41863418]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546491050[chr1:41863418]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41863402 41863423 MAFG JASPAR yes 28385054
chr1 41863414 41863418 LFA1 TRANSFAC yes 28385057
chr1 41863417 41863430 SMAD2 JASPAR yes 28385058
Genes associated with rs546491050[chr1:41863418], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More