EnhancerDB
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  3. rs546590023[chr16:14594248]
Enhancers that have rs546590023[chr16:14594248]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 14575925 14608495 enh3906
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546590023[chr16:14594248]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 14594233 14594254 IRF1 JASPAR yes 9703213
chr16 14594235 14594250 PRDM1 JASPAR yes 9703214
chr16 14594235 14594250 STAT2 JASPAR yes 9703215
chr16 14594237 14594249 IRF1 JASPAR yes 9703216
chr16 14594241 14594261 RREB1 JASPAR yes 9703217
chr16 14594241 14594262 IRF1 JASPAR yes 9703218
chr16 14594246 14594266 RREB1 JASPAR yes 9703219
chr16 14594247 14594268 IRF1 JASPAR yes 9703220
chr16 14594248 14594254 TCF4 TRANSFAC yes 9703221
chr16 14594248 14594263 FOXP1 JASPAR yes 9703222
Genes associated with rs546590023[chr16:14594248], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More