EnhancerDB
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  3. rs546590626[chr2:238612794]
Enhancers that have rs546590626[chr2:238612794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546590626[chr2:238612794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238612778 238612794 SOX4 JASPAR yes 82134775
chr2 238612781 238612794 ZBTB18 JASPAR yes 82134776
chr2 238612783 238612795 TAL1 JASPAR yes 82134777
chr2 238612788 238612809 IRF1 JASPAR yes 82134778
chr2 238612789 238612810 IRF1 JASPAR yes 82134779
chr2 238612790 238612811 IRF1 JASPAR yes 82134780
chr2 238612791 238612806 FOXP1 JASPAR yes 82134781
chr2 238612791 238612812 IRF1 JASPAR yes 82134782
chr2 238612792 238612813 IRF1 JASPAR yes 82134783
chr2 238612793 238612808 FOXP1 JASPAR yes 82134784
chr2 238612794 238612809 FOXP1 JASPAR yes 82134785
Genes associated with rs546590626[chr2:238612794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More