EnhancerDB
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  3. rs546637714[chr19:11252198]
Enhancers that have rs546637714[chr19:11252198]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11246465 11256159 enh17922
Bone Marrow (K562) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
chr19 11251931 11254703 vista790
VISTA
Transcript factors that have rs546637714[chr19:11252198]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 21849614
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 107690072
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 108384626
chr19 11252021 11254530 ZNF143 GTRD no Epithelial (MCF-7) 108384627
chr19 11252023 11253677 ZNF143 GTRD no Epithelial (MCF-7) 21849615
chr19 11252023 11253677 ZNF143 GTRD no Epithelial (MCF-7) 107690073
chr19 11252023 11253677 ZNF143 GTRD no Epithelial (MCF-7) 108384628
chr19 11252190 11252208 RARA JASPAR yes 108571452
chr19 11252190 11252208 RARA JASPAR yes 112457808
chr19 11252197 11252210 NR2F1 JASPAR yes 108571453
chr19 11252197 11252210 NR2F1 JASPAR yes 112457809
Genes associated with rs546637714[chr19:11252198], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More