EnhancerDB
  1. Home
  2. SNP
  3. rs546660418[chr2:75079822]
Enhancers that have rs546660418[chr2:75079822]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 75065325 75080614 enh5655
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546660418[chr2:75079822]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 75079808 75079823 LEF1 JASPAR yes 75109847
chr2 75079812 75079827 FOXP1 JASPAR yes 75109848
chr2 75079812 75079833 IRF1 JASPAR yes 75109849
chr2 75079815 75079830 FOXP1 JASPAR yes 75109851
chr2 75079817 75079832 FOXP1 JASPAR yes 75109852
chr2 75079819 75079839 RREB1 JASPAR yes 75109853
chr2 75079822 75079834 FOXC2 JASPAR yes 75109854
Genes associated with rs546660418[chr2:75079822], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More