EnhancerDB
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  3. rs546663571[chr17:41519990]
Enhancers that have rs546663571[chr17:41519990]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 41518125 41539515 enh17169
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Prostate (RWPE1) Cervix (HeLa-S3) Esophagus Astrocyte Lung (A549) Stomach Placenta Thyroid Adrenal Lung (PC-9) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs546663571[chr17:41519990]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 41517754 41520458 P63 GTRD no Skin (Keratinocyte) 21760255
chr17 41518601 41520589 ZNF274 GTRD no Cervix (HeLa-S3) 21760261
chr17 41518675 41520523 ZNF274 GTRD no Cervix (HeLa-S3) 21760263
chr17 41518717 41520290 P63 GTRD no Skin (Keratinocyte) 21760264
chr17 41518767 41523144 ZNF274 GTRD no Cervix (HeLa-S3) 21760266
chr17 41518888 41520332 ZNF143 GTRD no Epithelial (MCF-7) 21760274
chr17 41518935 41523274 ZNF143 GTRD no Epithelial (MCF-7) 21760279
chr17 41519067 41520375 ZNF143 GTRD no Epithelial (MCF-7) 21760285
chr17 41519071 41520210 ZNF143 GTRD no Epithelial (MCF-7) 21760286
chr17 41519090 41520229 ZNF143 GTRD no Epithelial (MCF-7) 21760288
chr17 41519113 41520233 ZNF143 GTRD no Epithelial (MCF-7) 21760289
chr17 41519231 41520212 P63 GTRD no Skin (Keratinocyte) 21760291
chr17 41519241 41520285 P63 GTRD no Skin (Keratinocyte) 21760292
chr17 41519281 41523404 ZNF143 GTRD no Epithelial (MCF-7) 21760293
chr17 41519330 41520299 ZNF143 GTRD no Epithelial (MCF-7) 21760294
chr17 41519456 41520215 ZNF143 GTRD no Epithelial (MCF-7) 21760295
chr17 41519623 41520247 ZNF143 GTRD no Epithelial (MCF-7) 21760296
chr17 41519751 41520013 ZNF274 GTRD no Liver (HepG2) 21760297
chr17 41519984 41519996 TAL1 JASPAR yes 54346882
Genes associated with rs546663571[chr17:41519990], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More