EnhancerDB
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  3. rs546679840[chr2:38655968]
Enhancers that have rs546679840[chr2:38655968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38653105 38683515 enh33236
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Colon (HCT116) Breast Uterus Thyroid Lung (PC-9) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs546679840[chr2:38655968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38655948 38655969 ZNF263 JASPAR yes 73139148
chr2 38655949 38655970 ZNF263 JASPAR yes 73139149
chr2 38655953 38655974 ZNF263 JASPAR yes 73139150
chr2 38655955 38655976 ZNF263 JASPAR yes 73139151
chr2 38655956 38655977 ZNF263 JASPAR yes 73139152
chr2 38655957 38655978 IRF1 JASPAR yes 73139153
chr2 38655958 38655973 PRDM1 JASPAR yes 73139154
chr2 38655958 38655979 ZNF263 JASPAR yes 73139155
chr2 38655959 38655980 ZNF263 JASPAR yes 73139156
chr2 38655962 38655983 ZNF263 JASPAR yes 73139157
chr2 38655965 38655986 ZNF263 JASPAR yes 73139158
chr2 38655968 38655989 ZNF263 JASPAR yes 73139159
Genes associated with rs546679840[chr2:38655968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More