EnhancerDB
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  3. rs546681170[chr1:229361905]
Enhancers that have rs546681170[chr1:229361905]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229351665 229369695 enh12764
Liver Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs546681170[chr1:229361905]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229361884 229361905 IRF1 JASPAR yes 35976992
chr1 229361888 229361909 IRF1 JASPAR yes 35976994
chr1 229361889 229361910 IRF1 JASPAR yes 35976995
chr1 229361890 229361905 FOXP1 JASPAR yes 35976996
chr1 229361890 229361905 LEF1 JASPAR yes 35976997
chr1 229361890 229361911 IRF1 JASPAR yes 35976998
chr1 229361894 229361915 IRF1 JASPAR yes 35976999
chr1 229361895 229361910 FOXP1 JASPAR yes 35977000
chr1 229361895 229361916 IRF1 JASPAR yes 35977001
chr1 229361896 229361917 IRF1 JASPAR yes 35977002
chr1 229361900 229361921 IRF1 JASPAR yes 35977003
chr1 229361901 229361916 FOXP1 JASPAR yes 35977004
chr1 229361901 229361922 IRF1 JASPAR yes 35977005
chr1 229361905 229361920 STAT2 JASPAR yes 35977006
chr1 229361905 229361926 IRF1 JASPAR yes 35977007
Genes associated with rs546681170[chr1:229361905], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More