EnhancerDB
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  3. rs546759423[chr5:148943838]
Enhancers that have rs546759423[chr5:148943838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 148937365 148947295 enh8790
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546759423[chr5:148943838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 148943825 148943839 GATA2 JASPAR yes 66824866
chr5 148943838 148943849 CDX2 JASPAR yes 66824868
Genes associated with rs546759423[chr5:148943838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More