EnhancerDB
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  3. rs546813061[chr19:4377837]
Enhancers that have rs546813061[chr19:4377837]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546813061[chr19:4377837]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 21840937
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371003
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371004
chr19 4372944 4378227 TCF7L2 GTRD no Colon (HCT116) 108371005
chr19 4374143 4377937 ZNF143 GTRD no Epithelial (MCF-7) 21840999
chr19 4374143 4377937 ZNF143 GTRD no Epithelial (MCF-7) 108371180
chr19 4374143 4377937 ZNF143 GTRD no Epithelial (MCF-7) 108371181
chr19 4374143 4377937 ZNF143 GTRD no Epithelial (MCF-7) 108371182
chr19 4374269 4377879 ZNF143 GTRD no Epithelial (MCF-7) 21841014
chr19 4374269 4377879 ZNF143 GTRD no Epithelial (MCF-7) 108371226
chr19 4374269 4377879 ZNF143 GTRD no Epithelial (MCF-7) 108371227
chr19 4374269 4377879 ZNF143 GTRD no Epithelial (MCF-7) 108371228
chr19 4374356 4377884 ZNF143 GTRD no Epithelial (MCF-7) 21841051
chr19 4374356 4377884 ZNF143 GTRD no Epithelial (MCF-7) 108371329
chr19 4374356 4377884 ZNF143 GTRD no Epithelial (MCF-7) 108371330
chr19 4374356 4377884 ZNF143 GTRD no Epithelial (MCF-7) 108371331
chr19 4374458 4378122 ZNF143 GTRD no Epithelial (MCF-7) 21841081
chr19 4374458 4378122 ZNF143 GTRD no Epithelial (MCF-7) 108371390
chr19 4374458 4378122 ZNF143 GTRD no Epithelial (MCF-7) 108371391
chr19 4375765 4377976 TCF7L2 GTRD no Colon (HCT116) 21841321
chr19 4375765 4377976 TCF7L2 GTRD no Colon (HCT116) 108371805
chr19 4375768 4378389 TCF7L2 GTRD no Colon (HCT116) 21841327
chr19 4375768 4378389 TCF7L2 GTRD no Colon (HCT116) 108371811
Genes associated with rs546813061[chr19:4377837], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More