EnhancerDB
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  3. rs546821617[chr6:44000748]
Enhancers that have rs546821617[chr6:44000748]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546821617[chr6:44000748]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44000732 44000752 PPARG JASPAR yes 101815253
chr6 44000746 44000762 T JASPAR yes 101815254
chr6 44000747 44000757 EN2 JASPAR yes 101815255
chr6 44000747 44000757 GBX2 JASPAR yes 101815256
chr6 44000748 44000756 BARX1 JASPAR yes 101815257
chr6 44000748 44000756 EN1 JASPAR yes 101815258
chr6 44000748 44000756 ISL2 JASPAR yes 101815259
chr6 44000748 44000756 MSX1 JASPAR yes 101815260
chr6 44000748 44000756 MSX2 JASPAR yes 101815261
chr6 44000748 44000756 PDX1 JASPAR yes 101815262
Genes associated with rs546821617[chr6:44000748], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More