EnhancerDB
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  3. rs546822234[chr16:4341620]
Enhancers that have rs546822234[chr16:4341620]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs546822234[chr16:4341620]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4340328 4342002 ZNF143 GTRD no Epithelial (MCF-7) 21686418
chr16 4340795 4341627 ZNF143 GTRD no Epithelial (MCF-7) 21686430
chr16 4340808 4341968 ZNF143 GTRD no Epithelial (MCF-7) 21686431
chr16 4340967 4341866 TCF7L2 GTRD no Colon (HCT116) 21686432
chr16 4341098 4341694 TCF7L2 GTRD no Colon (HCT116) 21686434
chr16 4341260 4341906 TCF7L2 GTRD no Colon (HCT116) 21686435
chr16 4341611 4341629 E2F3 JASPAR yes 9267399
chr16 4341614 4341625 CEBPB JASPAR yes 9267400
chr16 4341615 4341625 CEBPB JASPAR yes 9267401
chr16 4341615 4341625 CEBPD JASPAR yes 9267402
chr16 4341615 4341625 CEBPE JASPAR yes 9267403
chr16 4341615 4341625 CEBPG JASPAR yes 9267404
Genes associated with rs546822234[chr16:4341620], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More