EnhancerDB
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  3. rs546882660[chr11:62212002]
Enhancers that have rs546882660[chr11:62212002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62190145 62243455 enh13972
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr11 62211626 62212261 vista10494
VISTA
Transcript factors that have rs546882660[chr11:62212002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62211769 62212125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488762
chr11 62211769 62212125 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974420
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21488763
chr11 62211980 62212290 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107974421
chr11 62212000 62212012 NHLH1 JASPAR yes 39201658
chr11 62212000 62212012 NHLH1 JASPAR yes 114080189
chr11 62212001 62212011 NHLH1 JASPAR yes 39201659
chr11 62212001 62212011 NHLH1 JASPAR yes 114080190
Genes associated with rs546882660[chr11:62212002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More