EnhancerDB
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  3. rs546923507[chr19:4372659]
Enhancers that have rs546923507[chr19:4372659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4365204 4379535 enh4970
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546923507[chr19:4372659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 21840936
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 108371001
chr19 4372618 4375651 TCF7L2 GTRD no Colon (HCT116) 108371002
chr19 4372641 4372660 REST JASPAR yes 112169414
chr19 4372650 4372663 ZBTB18 JASPAR yes 112169415
chr19 4372651 4372661 FIGLA JASPAR yes 112169416
chr19 4372651 4372661 ID4 JASPAR yes 112169417
chr19 4372651 4372661 TCF3 JASPAR yes 112169418
chr19 4372651 4372661 TCF4 JASPAR yes 112169419
Genes associated with rs546923507[chr19:4372659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More