EnhancerDB
  1. Home
  2. SNP
  3. rs546928196[chr12:51769344]
Enhancers that have rs546928196[chr12:51769344]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 51760425 51770795 enh14718
Astrocyte Uterus Blood (T-cell) Stomach Kidney Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs546928196[chr12:51769344]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 51769336 51769357 IRF1 JASPAR yes 120885588
chr12 51769338 51769359 IRF1 JASPAR yes 120885589
chr12 51769341 51769356 FOXP1 JASPAR yes 120885590
chr12 51769343 51769358 FOXP1 JASPAR yes 120885591
chr12 51769344 51769359 FOXP1 JASPAR yes 120885592
Genes associated with rs546928196[chr12:51769344], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More