EnhancerDB
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  3. rs546959998[chr1:19767668]
Enhancers that have rs546959998[chr1:19767668]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19747725 19800935 enh99
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546959998[chr1:19767668]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19767662 19767672 MAX JASPAR yes 27190641
chr1 19767663 19767673 BHLHE40 JASPAR yes 27190642
chr1 19767663 19767673 MAX JASPAR yes 27190643
chr1 19767663 19767673 MLXIPL JASPAR yes 27190644
chr1 19767663 19767673 MLX JASPAR yes 27190645
chr1 19767663 19767673 MNT JASPAR yes 27190646
chr1 19767663 19767673 TFE3 JASPAR yes 27190647
chr1 19767665 19767670 MYC TRANSFAC yes 27190648
chr1 19767665 19767670 USF1 TRANSFAC yes 27190649
chr1 19767665 19767670 USF2 TRANSFAC yes 27190650
Genes associated with rs546959998[chr1:19767668], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More