EnhancerDB
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  3. rs546964737[chr17:56009654]
Enhancers that have rs546964737[chr17:56009654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs546964737[chr17:56009654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56009639 56009654 FOXP1 JASPAR yes 55001085
chr17 56009640 56009655 FOXP1 JASPAR yes 55001086
chr17 56009641 56009656 FOXP1 JASPAR yes 55001087
chr17 56009641 56009662 IRF1 JASPAR yes 55001088
chr17 56009642 56009657 FOXP1 JASPAR yes 55001089
chr17 56009642 56009663 IRF1 JASPAR yes 55001090
chr17 56009643 56009658 FOXP1 JASPAR yes 55001091
chr17 56009643 56009664 IRF1 JASPAR yes 55001092
chr17 56009644 56009659 FOXP1 JASPAR yes 55001093
chr17 56009644 56009665 IRF1 JASPAR yes 55001094
chr17 56009645 56009660 FOXP1 JASPAR yes 55001095
chr17 56009645 56009666 IRF1 JASPAR yes 55001096
chr17 56009646 56009661 FOXP1 JASPAR yes 55001097
chr17 56009646 56009667 IRF1 JASPAR yes 55001098
chr17 56009647 56009662 FOXP1 JASPAR yes 55001099
chr17 56009647 56009668 IRF1 JASPAR yes 55001100
chr17 56009648 56009663 FOXP1 JASPAR yes 55001101
chr17 56009649 56009664 FOXP1 JASPAR yes 55001102
chr17 56009649 56009670 IRF1 JASPAR yes 55001103
chr17 56009650 56009665 FOXP1 JASPAR yes 55001104
chr17 56009651 56009666 FOXP1 JASPAR yes 55001105
Genes associated with rs546964737[chr17:56009654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More