EnhancerDB
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  3. rs547008846[chr17:55541351]
Enhancers that have rs547008846[chr17:55541351]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs547008846[chr17:55541351]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 21773528
chr17 55540218 55541376 ZBTB33 GTRD no Lung (A549) 108274072
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 21773531
chr17 55540289 55541366 ZBTB33 GTRD no Lung (A549) 108274075
chr17 55541350 55541370 RREB1 JASPAR yes 54957496
Genes associated with rs547008846[chr17:55541351], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More