EnhancerDB
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  3. rs547130880[chr2:102341849]
Enhancers that have rs547130880[chr2:102341849]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547130880[chr2:102341849]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102341839 102341853 GATA2 JASPAR yes 75831305
chr2 102341841 102341849 GATA3 JASPAR yes 75831306
chr2 102341847 102341862 FOXP1 JASPAR yes 75831307
chr2 102341847 102341868 IRF1 JASPAR yes 75831308
chr2 102341848 102341863 FOXP1 JASPAR yes 75831309
Genes associated with rs547130880[chr2:102341849], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More