EnhancerDB
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  3. rs547131872[chr5:172271555]
Enhancers that have rs547131872[chr5:172271555]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547131872[chr5:172271555]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172271540 172271555 HNF4A JASPAR yes 67833719
chr5 172271541 172271556 HNF4G JASPAR yes 67833720
chr5 172271551 172271565 GLIS2 JASPAR yes 67833721
chr5 172271551 172271565 GLIS3 JASPAR yes 67833722
Genes associated with rs547131872[chr5:172271555], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More