EnhancerDB
  1. Home
  2. SNP
  3. rs547237860[chr1:212781834]
Enhancers that have rs547237860[chr1:212781834]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs547237860[chr1:212781834]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212780052 212787859 POLR2A UCSC Txn Factor no Conserved 107869176
chr1 212780418 212782777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869178
chr1 212781830 212781836 SP1 TRANSFAC yes 35141319
chr1 212781831 212781836 SP1 TRANSFAC yes 35141320
chr1 212781832 212781837 SP1 TRANSFAC yes 35141321
Genes associated with rs547237860[chr1:212781834], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More