EnhancerDB
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  3. rs547239630[chr12:125197082]
Enhancers that have rs547239630[chr12:125197082]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547239630[chr12:125197082]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125197071 125197082 DUX4 JASPAR yes 124412209
chr12 125197071 125197082 PHOX2A JASPAR yes 124412210
chr12 125197071 125197082 PROP1 JASPAR yes 124412211
chr12 125197080 125197086 TBP TRANSFAC yes 124412212
Genes associated with rs547239630[chr12:125197082], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More