EnhancerDB
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  3. rs547435268[chr15:39420287]
Enhancers that have rs547435268[chr15:39420287]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39405340 39429015 enh31301
Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs547435268[chr15:39420287]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39420016 39421186 P63 GTRD no Skin (Keratinocyte) 21647955
chr15 39420016 39421186 P63 GTRD no Skin (Keratinocyte) 108132328
chr15 39420059 39420403 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647956
chr15 39420073 39420403 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647957
chr15 39420120 39420333 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21647958
chr15 39420124 39420355 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647959
chr15 39420130 39420327 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21647960
chr15 39420248 39420898 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647961
chr15 39420280 39420294 GATA2 JASPAR yes 22855642
chr15 39420282 39420290 GATA3 JASPAR yes 22855643
chr15 39420287 39420296 VENTX JASPAR yes 22855644
chr15 39420287 39420297 GBX1 JASPAR yes 22855645
chr15 39420287 39420297 GBX2 JASPAR yes 22855646
chr15 39420287 39420297 HOXB3 JASPAR yes 22855647
Genes associated with rs547435268[chr15:39420287], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More