EnhancerDB
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  3. rs547488653[chr17:65468998]
Enhancers that have rs547488653[chr17:65468998]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs547488653[chr17:65468998]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65468988 65468999 RUNX1 JASPAR yes 55508536
chr17 65468996 65469000 YY1 TRANSFAC yes 55508537
chr17 65468997 65469012 FOXP1 JASPAR yes 55508538
chr17 65468998 65469013 FOXP1 JASPAR yes 55508539
Genes associated with rs547488653[chr17:65468998], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More