EnhancerDB
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  3. rs547782107[chr2:232535551]
Enhancers that have rs547782107[chr2:232535551]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs547782107[chr2:232535551]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232535540 232535551 USF1 JASPAR yes 81734382
chr2 232535540 232535551 USF2 JASPAR yes 81734383
chr2 232535543 232535556 NFKB1 JASPAR yes 81734384
chr2 232535548 232535554 ZNF354C JASPAR yes 81734385
chr2 232535549 232535559 ID4 JASPAR yes 81734386
chr2 232535550 232535559 SNAI2 JASPAR yes 81734387
chr2 232535551 232535556 USF2 TRANSFAC yes 81734388
Genes associated with rs547782107[chr2:232535551], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More