EnhancerDB
  1. Home
  2. SNP
  3. rs548041582[chr6:34997947]
Enhancers that have rs548041582[chr6:34997947]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 34986593 35008101 enh23172
Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548041582[chr6:34997947]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 34997937 34997947 POU6F2 JASPAR yes 101257145
chr6 34997946 34997967 IRF1 JASPAR yes 101257146
chr6 34997947 34997968 IRF1 JASPAR yes 101257147
Genes associated with rs548041582[chr6:34997947], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More