EnhancerDB
  1. Home
  2. SNP
  3. rs548056813[chr16:4333269]
Enhancers that have rs548056813[chr16:4333269]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548056813[chr16:4333269]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4331935 4333290 TCF7L2 GTRD no Colon (HCT116) 21686278
chr16 4331940 4333630 ZNF143 GTRD no Epithelial (MCF-7) 21686279
chr16 4331940 4333886 ZNF143 GTRD no Epithelial (MCF-7) 21686280
chr16 4332022 4333423 TCF7L2 GTRD no Colon (HCT116) 21686281
chr16 4332646 4333439 TCF7L2 GTRD no Colon (HCT116) 21686284
chr16 4332899 4333596 ZNF143 GTRD no Epithelial (MCF-7) 21686286
chr16 4333117 4333814 TCF7L2 GTRD no Colon (HCT116) 21686287
Genes associated with rs548056813[chr16:4333269], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More