EnhancerDB
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  3. rs548100692[chr17:65463170]
Enhancers that have rs548100692[chr17:65463170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs548100692[chr17:65463170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65463167 65463188 IRF1 JASPAR yes 55507522
chr17 65463168 65463189 IRF1 JASPAR yes 55507523
chr17 65463169 65463184 FOXP1 JASPAR yes 55507524
chr17 65463169 65463190 IRF1 JASPAR yes 55507525
chr17 65463170 65463185 FOXP1 JASPAR yes 55507526
chr17 65463170 65463191 IRF1 JASPAR yes 55507527
Genes associated with rs548100692[chr17:65463170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More