EnhancerDB
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  3. rs548104587[chr1:117418177]
Enhancers that have rs548104587[chr1:117418177]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117411045 117431652 enh12190
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Epithelial (MCF-7) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung
Transcript factors that have rs548104587[chr1:117418177]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117418169 117418184 TFAP2A JASPAR yes 31847457
chr1 117418171 117418177 NFE2 TRANSFAC yes 31847458
chr1 117418172 117418183 TFAP2A JASPAR yes 31847459
chr1 117418172 117418184 TFAP2A JASPAR yes 31847460
Genes associated with rs548104587[chr1:117418177], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More