EnhancerDB
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  3. rs548158862[chr12:106515966]
Enhancers that have rs548158862[chr12:106515966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 106512365 106532655 enh29959
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Stomach Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Heart
chr12 106515905 106516067 vista14757
VISTA
Transcript factors that have rs548158862[chr12:106515966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 106515879 106516445 ZNF274 GTRD no Bone Marrow (K562) 108055961
chr12 106515960 106515970 CLOCK JASPAR yes 82470636
chr12 106515960 106515970 MAX JASPAR yes 82470637
chr12 106515960 106515970 CLOCK JASPAR yes 123491704
chr12 106515960 106515970 MAX JASPAR yes 123491705
chr12 106515961 106515971 MAX JASPAR yes 82470638
chr12 106515961 106515971 MAX JASPAR yes 123491706
chr12 106515962 106515967 MYC TRANSFAC yes 82470639
chr12 106515962 106515967 USF1 TRANSFAC yes 82470640
chr12 106515962 106515967 USF2 TRANSFAC yes 82470641
chr12 106515962 106515967 MYC TRANSFAC yes 123491707
chr12 106515962 106515967 USF1 TRANSFAC yes 123491708
chr12 106515962 106515967 USF2 TRANSFAC yes 123491709
chr12 106515962 106515969 USF1 JASPAR yes 82470642
chr12 106515962 106515969 USF1 JASPAR yes 123491710
Genes associated with rs548158862[chr12:106515966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More