EnhancerDB
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  3. rs548165953[chr1:8769006]
Enhancers that have rs548165953[chr1:8769006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8756385 8790235 enh11474
Brain (SK-N-MC) Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548165953[chr1:8769006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8768997 8769016 PAX5 JASPAR yes 26589513
chr1 8769005 8769009 NFE TRANSFAC yes 26589514
Genes associated with rs548165953[chr1:8769006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More