EnhancerDB
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  3. rs548167288[chr6:30741577]
Enhancers that have rs548167288[chr6:30741577]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548167288[chr6:30741577]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30741575 30741585 EN2 JASPAR yes 101047413
chr6 30741575 30741585 ESX1 JASPAR yes 101047414
chr6 30741575 30741585 GBX1 JASPAR yes 101047415
chr6 30741575 30741585 GBX2 JASPAR yes 101047416
chr6 30741575 30741585 GSX1 JASPAR yes 101047417
chr6 30741575 30741585 LBX2 JASPAR yes 101047418
chr6 30741575 30741585 LHX2 JASPAR yes 101047419
chr6 30741576 30741584 BARX1 JASPAR yes 101047420
chr6 30741576 30741584 BSX JASPAR yes 101047421
chr6 30741576 30741584 EN1 JASPAR yes 101047422
chr6 30741576 30741584 ISX JASPAR yes 101047423
chr6 30741576 30741584 LHX9 JASPAR yes 101047424
chr6 30741576 30741584 MSX1 JASPAR yes 101047425
chr6 30741576 30741584 MSX2 JASPAR yes 101047426
chr6 30741576 30741584 PRRX1 JASPAR yes 101047427
chr6 30741576 30741584 RAX2 JASPAR yes 101047428
chr6 30741576 30741584 SHOX JASPAR yes 101047429
Genes associated with rs548167288[chr6:30741577], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More