EnhancerDB
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  3. rs548232055[chr1:235120388]
Enhancers that have rs548232055[chr1:235120388]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 235120162 235120433 vista5680
VISTA
Transcript factors that have rs548232055[chr1:235120388]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235119925 235121066 TEF1 GTRD no Bone (Osteoblast) 21402606
chr1 235119925 235121066 TEF1 GTRD no Bone (Osteoblast) 107885394
chr1 235119970 235120426 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402607
chr1 235119970 235120426 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885395
chr1 235120120 235120520 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402609
chr1 235120120 235120520 NR2F2 UCSC Txn Factor no Conserved 107885397
chr1 235120120 235120520 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885398
chr1 235120138 235120582 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21402610
chr1 235120138 235120582 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107885399
chr1 235120144 235120500 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402611
chr1 235120144 235120500 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885400
chr1 235120147 235120511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402612
chr1 235120147 235120511 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885401
chr1 235120157 235120593 ZNF274 GTRD no Cervix (HeLa-S3) 21402613
chr1 235120157 235120593 ZNF274 GTRD no Cervix (HeLa-S3) 107885402
chr1 235120174 235120764 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402614
chr1 235120174 235120764 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885403
chr1 235120186 235120466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402615
chr1 235120186 235120466 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885404
chr1 235120188 235120468 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402616
chr1 235120188 235120468 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885405
chr1 235120188 235120631 ZBTB33 GTRD no Lung (A549) 107885406
chr1 235120194 235120660 ZNF274 GTRD no Bone Marrow (K562) 21402617
chr1 235120194 235120660 ZNF274 GTRD no Bone Marrow (K562) 107885408
chr1 235120207 235120487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402618
chr1 235120207 235120487 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885409
chr1 235120218 235120642 ZNF143 GTRD no Epithelial (MCF-7) 21402619
chr1 235120218 235120642 ZNF143 GTRD no Epithelial (MCF-7) 107885410
chr1 235120231 235120683 ZBTB33 GTRD no Lung (A549) 107885411
chr1 235120242 235120478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402620
chr1 235120242 235120478 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885412
chr1 235120245 235120455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402621
chr1 235120245 235120455 POU2F2 UCSC Txn Factor no Conserved 107885413
chr1 235120245 235120455 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885414
chr1 235120252 235120476 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21402622
chr1 235120252 235120476 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107885415
chr1 235120255 235120698 TCF7L2 GTRD no Colon (HCT116) 21402623
chr1 235120255 235120698 TCF7L2 GTRD no Colon (HCT116) 107885416
chr1 235120308 235120432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402624
chr1 235120308 235120432 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107885417
chr1 235120326 235120645 ZNF274 GTRD no Liver (HepG2) 21402625
chr1 235120326 235120645 ZNF274 GTRD no Liver (HepG2) 107885418
chr1 235120384 235120394 TEAD1 JASPAR yes 36338375
chr1 235120384 235120394 TEAD4 JASPAR yes 36338376
chr1 235120384 235120394 TEAD1 JASPAR yes 118487080
chr1 235120384 235120394 TEAD4 JASPAR yes 118487081
chr1 235120384 235120396 TEAD1 JASPAR yes 36338377
chr1 235120384 235120396 TEAD1 JASPAR yes 118487082
chr1 235120388 235120402 SPI1 JASPAR yes 36338378
chr1 235120388 235120402 SPIC JASPAR yes 36338379
chr1 235120388 235120402 SPI1 JASPAR yes 118487083
chr1 235120388 235120402 SPIC JASPAR yes 118487084
Genes associated with rs548232055[chr1:235120388], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More