EnhancerDB
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  3. rs548233895[chr3:185486596]
Enhancers that have rs548233895[chr3:185486596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548233895[chr3:185486596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185486590 185486603 NFKB1 JASPAR yes 8286720
chr3 185486592 185486598 ZNF354C JASPAR yes 8286721
chr3 185486595 185486606 USF1 JASPAR yes 8286722
chr3 185486595 185486606 USF2 JASPAR yes 8286723
chr3 185486596 185486606 SREBF2 JASPAR yes 8286724
Genes associated with rs548233895[chr3:185486596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More