EnhancerDB
  1. Home
  2. SNP
  3. rs548247339[chr1:235060448]
Enhancers that have rs548247339[chr1:235060448]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235041625 235072655 enh12798
Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548247339[chr1:235060448]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 21400362
chr1 235058866 235063947 ZNF274 GTRD no Liver (HepG2) 107883952
chr1 235059804 235061588 ZNF143 GTRD no Epithelial (MCF-7) 21400364
chr1 235060113 235061605 ZNF143 GTRD no Epithelial (MCF-7) 21400365
chr1 235060150 235061799 ZNF143 GTRD no Epithelial (MCF-7) 21400366
chr1 235060194 235061411 ZNF143 GTRD no Epithelial (MCF-7) 21400367
chr1 235060205 235061479 ZNF143 GTRD no Epithelial (MCF-7) 21400368
chr1 235060217 235060878 ZNF143 GTRD no Epithelial (MCF-7) 21400369
chr1 235060220 235061438 ZNF143 GTRD no Epithelial (MCF-7) 21400370
chr1 235060223 235061427 ZNF143 GTRD no Epithelial (MCF-7) 21400371
chr1 235060225 235061364 ZNF143 GTRD no Epithelial (MCF-7) 21400372
chr1 235060256 235061815 ZNF143 GTRD no Epithelial (MCF-7) 21400373
chr1 235060260 235061298 ZNF143 GTRD no Epithelial (MCF-7) 21400374
chr1 235060270 235061311 ZNF274 GTRD no Liver (HepG2) 21400375
chr1 235060277 235061089 ZNF143 GTRD no Epithelial (MCF-7) 21400376
chr1 235060277 235061838 ZNF143 GTRD no Epithelial (MCF-7) 21400377
chr1 235060281 235061826 ZNF143 GTRD no Epithelial (MCF-7) 21400378
chr1 235060283 235061490 ZNF143 GTRD no Epithelial (MCF-7) 21400379
chr1 235060315 235061407 ZNF143 GTRD no Epithelial (MCF-7) 21400380
chr1 235060318 235061115 ZNF143 GTRD no Epithelial (MCF-7) 21400381
chr1 235060318 235061408 ZNF143 GTRD no Epithelial (MCF-7) 21400382
chr1 235060328 235061452 ZNF143 GTRD no Epithelial (MCF-7) 21400383
chr1 235060339 235061186 ZNF143 GTRD no Epithelial (MCF-7) 21400384
chr1 235060343 235061217 ZNF143 GTRD no Epithelial (MCF-7) 21400385
chr1 235060351 235061696 ZNF274 GTRD no Liver (HepG2) 21400386
chr1 235060362 235061206 ZNF143 GTRD no Epithelial (MCF-7) 21400387
chr1 235060373 235061143 ZNF143 GTRD no Epithelial (MCF-7) 21400388
chr1 235060377 235061207 ZNF143 GTRD no Epithelial (MCF-7) 21400389
chr1 235060381 235061962 ZNF143 GTRD no Epithelial (MCF-7) 21400390
chr1 235060399 235061320 ZNF143 GTRD no Epithelial (MCF-7) 21400391
chr1 235060401 235061402 ZNF274 GTRD no Liver (HepG2) 21400392
chr1 235060403 235061359 ZNF143 GTRD no Epithelial (MCF-7) 21400393
chr1 235060409 235061157 ZNF143 GTRD no Epithelial (MCF-7) 21400394
chr1 235060411 235061090 ZNF143 GTRD no Epithelial (MCF-7) 21400395
chr1 235060417 235061184 ZNF274 GTRD no Blood (GM12878) 21400396
chr1 235060419 235061343 ZNF143 GTRD no Epithelial (MCF-7) 21400397
chr1 235060420 235061217 ZNF143 GTRD no Epithelial (MCF-7) 21400398
chr1 235060422 235061228 ZNF274 GTRD no Liver (HepG2) 21400399
chr1 235060437 235060452 HNF4A JASPAR yes 36331056
chr1 235060437 235061923 ZNF143 GTRD no Epithelial (MCF-7) 21400400
chr1 235060438 235060453 HNF4G JASPAR yes 36331057
chr1 235060438 235061273 ZNF143 GTRD no Epithelial (MCF-7) 21400401
chr1 235060443 235060450 E2F1 TRANSFAC yes 36331058
chr1 235060445 235061339 ZNF143 GTRD no Epithelial (MCF-7) 21400402
Genes associated with rs548247339[chr1:235060448], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More