EnhancerDB
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  3. rs548319387[chr1:235096476]
Enhancers that have rs548319387[chr1:235096476]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548319387[chr1:235096476]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235096298 235096879 TCF12 UCSC Txn Factor no Conserved 107884660
chr1 235096298 235096879 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884661
chr1 235096325 235096921 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21401470
chr1 235096325 235096921 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107884662
chr1 235096328 235096872 EP300 UCSC Txn Factor no Conserved 107884663
chr1 235096328 235096872 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884664
chr1 235096333 235096897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401471
chr1 235096333 235096897 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884665
chr1 235096353 235096893 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884666
chr1 235096356 235096640 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884667
chr1 235096360 235096772 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401472
chr1 235096360 235096772 FOXA2 UCSC Txn Factor no Conserved 107884668
chr1 235096360 235096772 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884669
chr1 235096362 235096840 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401473
chr1 235096362 235096840 NFIC UCSC Txn Factor no Conserved 107884670
chr1 235096362 235096840 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884671
chr1 235096376 235096775 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401474
chr1 235096376 235096775 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884672
chr1 235096376 235096776 FOXA1 UCSC Txn Factor no Conserved 107884673
chr1 235096405 235096861 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401475
chr1 235096405 235096861 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884674
chr1 235096414 235096804 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401476
chr1 235096414 235096804 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884675
chr1 235096442 235096806 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401477
chr1 235096442 235096806 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107884676
chr1 235096446 235096725 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107884677
chr1 235096451 235096851 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401478
chr1 235096451 235096851 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884678
chr1 235096455 235096845 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401479
chr1 235096455 235096845 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884679
chr1 235096469 235096479 CUX1 JASPAR yes 36334992
chr1 235096469 235096479 CUX2 JASPAR yes 36334993
chr1 235096470 235096485 AR JASPAR yes 36334994
chr1 235096470 235096617 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401480
chr1 235096470 235096617 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107884680
Genes associated with rs548319387[chr1:235096476], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More