EnhancerDB
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  3. rs548330197[chr15:55514820]
Enhancers that have rs548330197[chr15:55514820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 55507525 55515978 enh3597
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs548330197[chr15:55514820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 55513642 55514834 ZBTB33 GTRD no Lung (A549) 108139707
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139748
chr15 55513992 55515571 ZNF143 GTRD no Epithelial (MCF-7) 108139749
chr15 55514701 55515297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654568
chr15 55514701 55515297 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139751
chr15 55514781 55515136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21654569
chr15 55514781 55515136 RUNX3 UCSC Txn Factor no Conserved 108139752
chr15 55514781 55515136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108139753
chr15 55514806 55514827 ZNF263 JASPAR yes 23494430
chr15 55514810 55514831 ZNF263 JASPAR yes 23494433
chr15 55514814 55514824 MZF1 JASPAR yes 23494434
chr15 55514817 55514823 SP1 TRANSFAC yes 23494435
Genes associated with rs548330197[chr15:55514820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More