EnhancerDB
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  3. rs548338178[chr1:234638952]
Enhancers that have rs548338178[chr1:234638952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548338178[chr1:234638952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 21393522
chr1 234638296 234640396 ZNF274 GTRD no Liver (HepG2) 107880067
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 21393523
chr1 234638298 234640490 ZNF274 GTRD no Liver (HepG2) 107880068
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 21393524
chr1 234638328 234640463 ZNF274 GTRD no Liver (HepG2) 107880069
chr1 234638453 234640289 ZBTB33 GTRD no Lung (A549) 107880070
chr1 234638518 234640627 ZBTB33 GTRD no Lung (A549) 107880071
chr1 234638537 234639710 ZNF274 GTRD no Liver (HepG2) 21393526
chr1 234638556 234639820 ZNF274 GTRD no Liver (HepG2) 21393527
chr1 234638563 234639621 ZNF274 GTRD no Liver (HepG2) 21393528
chr1 234638575 234639656 ZNF143 GTRD no Epithelial (MCF-7) 21393529
chr1 234638579 234639616 ZNF143 GTRD no Epithelial (MCF-7) 21393530
chr1 234638580 234640751 ZBTB33 GTRD no Lung (A549) 107880072
chr1 234638587 234639717 ZNF274 GTRD no Liver (HepG2) 21393531
chr1 234638599 234639724 ZNF143 GTRD no Epithelial (MCF-7) 21393533
chr1 234638636 234638996 ZNF274 GTRD no Liver (HepG2) 21393534
chr1 234638636 234639676 ZNF143 GTRD no Epithelial (MCF-7) 21393535
chr1 234638646 234639707 ZNF143 GTRD no Epithelial (MCF-7) 21393536
chr1 234638661 234639926 ZNF274 GTRD no Liver (HepG2) 21393537
chr1 234638663 234640568 ZBTB33 GTRD no Lung (A549) 107880073
chr1 234638679 234639746 ZNF143 GTRD no Epithelial (MCF-7) 21393538
chr1 234638681 234639666 ZNF143 GTRD no Epithelial (MCF-7) 21393539
chr1 234638689 234639744 ZNF143 GTRD no Epithelial (MCF-7) 21393540
chr1 234638692 234639594 ZNF143 GTRD no Epithelial (MCF-7) 21393541
chr1 234638713 234639670 ZNF143 GTRD no Epithelial (MCF-7) 21393542
chr1 234638746 234639450 ZNF143 GTRD no Epithelial (MCF-7) 21393543
chr1 234638749 234639657 ZNF143 GTRD no Epithelial (MCF-7) 21393544
chr1 234638750 234639628 ZNF143 GTRD no Epithelial (MCF-7) 21393545
chr1 234638756 234640494 ZNF274 GTRD no Liver (HepG2) 21393546
chr1 234638756 234640494 ZNF274 GTRD no Liver (HepG2) 107880074
chr1 234638757 234639665 ZNF143 GTRD no Epithelial (MCF-7) 21393547
chr1 234638775 234640004 ZBTB33 GTRD no Lung (A549) 107880075
chr1 234638786 234639460 ZNF143 GTRD no Epithelial (MCF-7) 21393548
chr1 234638792 234639862 ZNF274 GTRD no Liver (HepG2) 21393549
chr1 234638806 234639513 ZNF143 GTRD no Epithelial (MCF-7) 21393550
chr1 234638807 234640513 ZBTB33 GTRD no Lung (A549) 107880076
chr1 234638817 234639531 ZNF143 GTRD no Epithelial (MCF-7) 21393551
chr1 234638830 234639385 ZNF143 GTRD no Epithelial (MCF-7) 21393552
chr1 234638835 234639574 ZNF143 GTRD no Epithelial (MCF-7) 21393553
chr1 234638836 234640018 ZNF274 GTRD no Liver (HepG2) 21393554
chr1 234638836 234640018 ZNF274 GTRD no Liver (HepG2) 107880077
chr1 234638837 234639488 ZNF143 GTRD no Epithelial (MCF-7) 21393555
chr1 234638838 234639930 ZNF274 GTRD no Liver (HepG2) 21393556
chr1 234638856 234639465 ZNF143 GTRD no Epithelial (MCF-7) 21393557
chr1 234638857 234639386 ZNF143 GTRD no Epithelial (MCF-7) 21393558
chr1 234638858 234639468 ZNF143 GTRD no Epithelial (MCF-7) 21393559
chr1 234638863 234639897 ZNF274 GTRD no Liver (HepG2) 21393560
chr1 234638864 234639500 ZNF143 GTRD no Epithelial (MCF-7) 21393561
chr1 234638872 234639442 ZNF143 GTRD no Epithelial (MCF-7) 21393562
chr1 234638876 234639413 ZNF143 GTRD no Epithelial (MCF-7) 21393563
chr1 234638894 234640080 ZBTB33 GTRD no Lung (A549) 107880078
chr1 234638900 234640524 ZNF274 GTRD no Liver (HepG2) 21393564
chr1 234638900 234640524 ZNF274 GTRD no Liver (HepG2) 107880079
chr1 234638902 234640415 ZNF274 GTRD no Liver (HepG2) 21393565
chr1 234638902 234640415 ZNF274 GTRD no Liver (HepG2) 107880080
chr1 234638913 234639311 ZNF143 GTRD no Epithelial (MCF-7) 21393566
chr1 234638915 234639385 ZNF143 GTRD no Epithelial (MCF-7) 21393567
chr1 234638917 234639561 ZNF143 GTRD no Epithelial (MCF-7) 21393568
chr1 234638920 234639443 ZNF143 GTRD no Epithelial (MCF-7) 21393569
chr1 234638922 234639507 ZNF143 GTRD no Epithelial (MCF-7) 21393570
chr1 234638924 234640069 ZNF274 GTRD no Liver (HepG2) 21393571
chr1 234638924 234640069 ZNF274 GTRD no Liver (HepG2) 107880081
chr1 234638925 234639658 ZNF143 GTRD no Epithelial (MCF-7) 21393572
chr1 234638940 234638954 NR2F1 JASPAR yes 36280092
chr1 234638941 234639473 ZNF143 GTRD no Epithelial (MCF-7) 21393573
chr1 234638949 234638959 MEF2A JASPAR yes 36280093
chr1 234638951 234639275 ZNF143 GTRD no Epithelial (MCF-7) 21393574
chr1 234638951 234640064 ZNF274 GTRD no Liver (HepG2) 21393575
chr1 234638951 234640064 ZNF274 GTRD no Liver (HepG2) 107880082
Genes associated with rs548338178[chr1:234638952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More