EnhancerDB
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  3. rs548366871[chr15:99981588]
Enhancers that have rs548366871[chr15:99981588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548366871[chr15:99981588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99980385 99981693 ZNF143 GTRD no Epithelial (MCF-7) 21682033
chr15 99980487 99982613 ZNF143 GTRD no Epithelial (MCF-7) 21682034
chr15 99980715 99981746 ZNF143 GTRD no Epithelial (MCF-7) 21682035
chr15 99980767 99981675 ZNF143 GTRD no Epithelial (MCF-7) 21682037
chr15 99980824 99981872 ZNF274 GTRD no Cervix (HeLa-S3) 21682038
chr15 99980936 99981759 ZNF274 GTRD no Bone Marrow (K562) 21682039
chr15 99980952 99981732 ZNF274 GTRD no Bone Marrow (K562) 21682040
chr15 99981008 99981830 ZNF143 GTRD no Epithelial (MCF-7) 21682041
chr15 99981040 99981801 ZNF143 GTRD no Epithelial (MCF-7) 21682042
chr15 99981058 99981655 ZNF143 GTRD no Epithelial (MCF-7) 21682043
chr15 99981066 99981736 ZNF274 GTRD no Bone Marrow (K562) 21682044
chr15 99981084 99981674 ZNF274 GTRD no Bone Marrow (K562) 21682045
chr15 99981131 99981715 ZNF143 GTRD no Epithelial (MCF-7) 21682047
chr15 99981180 99981707 ZNF274 GTRD no Bone Marrow (K562) 21682049
chr15 99981195 99981697 ZNF274 GTRD no Bone Marrow (K562) 21682050
chr15 99981196 99981684 ZNF274 GTRD no Cervix (HeLa-S3) 21682051
chr15 99981231 99981648 ZNF143 GTRD no Epithelial (MCF-7) 21682052
chr15 99981245 99981603 ZNF274 GTRD no Cervix (HeLa-S3) 21682053
chr15 99981252 99981612 ZNF274 GTRD no Bone Marrow (K562) 21682054
chr15 99981390 99981798 ZNF143 GTRD no Epithelial (MCF-7) 21682055
chr15 99981581 99981589 GATA3 JASPAR yes 25873844
Genes associated with rs548366871[chr15:99981588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More