EnhancerDB
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  3. rs548419764[chr1:157988693]
Enhancers that have rs548419764[chr1:157988693]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 157969514 158001213 enh12308
Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548419764[chr1:157988693]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 157988688 157988699 PHOX2A JASPAR yes 32458261
chr1 157988691 157988701 EMX2 JASPAR yes 32458262
chr1 157988691 157988701 EVX1 JASPAR yes 32458263
chr1 157988691 157988701 EVX2 JASPAR yes 32458264
chr1 157988691 157988701 LHX2 JASPAR yes 32458265
chr1 157988691 157988701 MEOX1 JASPAR yes 32458266
chr1 157988691 157988701 NOTO JASPAR yes 32458267
chr1 157988692 157988700 LBX1 JASPAR yes 32458268
chr1 157988692 157988700 PDX1 JASPAR yes 32458269
chr1 157988692 157988700 VAX1 JASPAR yes 32458270
chr1 157988692 157988700 VAX2 JASPAR yes 32458271
chr1 157988692 157988700 VSX1 JASPAR yes 32458272
chr1 157988692 157988700 VSX2 JASPAR yes 32458273
chr1 157988692 157988702 POU6F2 JASPAR yes 32458274
Genes associated with rs548419764[chr1:157988693], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More