EnhancerDB
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  3. rs548470870[chr12:109085010]
Enhancers that have rs548470870[chr12:109085010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109075725 109093399 enh14973
Bone Marrow (K562) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr12 109084686 109085066 vista14830
VISTA
Transcript factors that have rs548470870[chr12:109085010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109084294 109085112 ZNF274 GTRD no Liver (HepG2) 21571446
chr12 109084294 109085112 ZNF274 GTRD no Liver (HepG2) 108057202
chr12 109084302 109085033 ZNF274 GTRD no Liver (HepG2) 21571447
chr12 109084302 109085033 ZNF274 GTRD no Liver (HepG2) 108057203
chr12 109084308 109085018 ZNF274 GTRD no Liver (HepG2) 21571448
chr12 109084308 109085018 ZNF274 GTRD no Liver (HepG2) 108057204
chr12 109084318 109085137 ZNF274 GTRD no Liver (HepG2) 21571449
chr12 109084318 109085137 ZNF274 GTRD no Liver (HepG2) 108057205
chr12 109084364 109085044 ZNF274 GTRD no Liver (HepG2) 21571451
chr12 109084364 109085044 ZNF274 GTRD no Liver (HepG2) 108057207
chr12 109084686 109085997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571458
chr12 109084686 109085997 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057214
chr12 109084686 109086300 POLR2A UCSC Txn Factor no Conserved 108057215
chr12 109084693 109085175 ZNF274 GTRD no Liver (HepG2) 21571459
chr12 109084693 109085175 ZNF274 GTRD no Liver (HepG2) 108057216
chr12 109084733 109085233 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571460
chr12 109084733 109085233 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057217
chr12 109084789 109085405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21571461
chr12 109084789 109085405 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108057218
chr12 109084857 109085093 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571462
chr12 109084857 109085093 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057219
chr12 109084871 109085191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571463
chr12 109084871 109085191 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057220
chr12 109084901 109085171 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571464
chr12 109084901 109085171 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057221
chr12 109084902 109085178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21571465
chr12 109084902 109085178 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108057222
chr12 109084913 109085113 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571466
chr12 109084913 109085113 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057223
chr12 109084916 109085472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571467
chr12 109084916 109085472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057224
chr12 109084968 109085592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21571468
chr12 109084968 109085592 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108057225
chr12 109084991 109085607 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21571469
chr12 109084991 109085607 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108057226
chr12 109085000 109085012 HES5 JASPAR yes 82473780
chr12 109085000 109085012 PKNOX1 JASPAR yes 82473781
chr12 109085000 109085012 PKNOX2 JASPAR yes 82473782
chr12 109085000 109085012 TGIF1 JASPAR yes 82473783
chr12 109085000 109085012 TGIF2 JASPAR yes 82473784
chr12 109085000 109085012 HES5 JASPAR yes 123613308
chr12 109085000 109085012 PKNOX1 JASPAR yes 123613309
chr12 109085000 109085012 PKNOX2 JASPAR yes 123613310
chr12 109085000 109085012 TGIF1 JASPAR yes 123613311
chr12 109085000 109085012 TGIF2 JASPAR yes 123613312
chr12 109085001 109085011 CLOCK JASPAR yes 82473785
chr12 109085001 109085011 NEUROG2 JASPAR yes 82473786
chr12 109085001 109085011 CLOCK JASPAR yes 123613313
chr12 109085001 109085011 NEUROG2 JASPAR yes 123613314
chr12 109085002 109085012 MAX JASPAR yes 82473787
chr12 109085002 109085012 MAX JASPAR yes 123613315
Genes associated with rs548470870[chr12:109085010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More