EnhancerDB
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  3. rs548475395[chr1:117389086]
Enhancers that have rs548475395[chr1:117389086]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs548475395[chr1:117389086]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117388638 117389154 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333925
chr1 117388697 117389097 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333929
chr1 117388727 117389087 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333934
chr1 117388774 117389098 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21333936
chr1 117389079 117389094 STAT2 JASPAR yes 31843788
Genes associated with rs548475395[chr1:117389086], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More