EnhancerDB
  1. Home
  2. SNP
  3. rs548488744[chr19:11001497]
Enhancers that have rs548488744[chr19:11001497]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 10983285 11012541 enh5003
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs548488744[chr19:11001497]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11001476 11001497 IRF1 JASPAR yes 112444015
chr19 11001477 11001498 IRF1 JASPAR yes 112444017
chr19 11001478 11001499 IRF1 JASPAR yes 112444019
chr19 11001479 11001500 IRF1 JASPAR yes 112444021
chr19 11001482 11001497 FOXP1 JASPAR yes 112444024
chr19 11001483 11001498 FOXP1 JASPAR yes 112444025
chr19 11001484 11001499 FOXP1 JASPAR yes 112444026
chr19 11001485 11001500 FOXP1 JASPAR yes 112444027
chr19 11001486 11001501 FOXP1 JASPAR yes 112444028
chr19 11001487 11001502 FOXP1 JASPAR yes 112444029
Genes associated with rs548488744[chr19:11001497], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More