EnhancerDB
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Enhancers that have rs548502[chr18:55879898]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55867165 55894619 enh32734
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Heart
Transcript factors that have rs548502[chr18:55879898]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55879612 55879942 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338140
chr18 55879651 55879971 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108338141
chr18 55879893 55879904 CEBPB JASPAR yes 110927442
chr18 55879893 55879905 HLF JASPAR yes 110927443
chr18 55879894 55879905 CEBPA JASPAR yes 110927444
Genes associated with rs548502[chr18:55879898], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More