EnhancerDB
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  3. rs548528220[chr1:173379303]
Enhancers that have rs548528220[chr1:173379303]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs548528220[chr1:173379303]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173379063 173379360 SOX2 GTRD no Neural Stem Cells (H9) 21351279
chr1 173379292 173379308 SOX8 JASPAR yes 33196624
Genes associated with rs548528220[chr1:173379303], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More