EnhancerDB
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  3. rs548530864[chr2:27933505]
Enhancers that have rs548530864[chr2:27933505]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 27922526 27936875 enh18375
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548530864[chr2:27933505]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 27933497 27933508 DUX4 JASPAR yes 72583941
chr2 27933501 27933511 NFKB1 JASPAR yes 72583942
Genes associated with rs548530864[chr2:27933505], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More