EnhancerDB
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  3. rs548534461[chr19:2639720]
Enhancers that have rs548534461[chr19:2639720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2605719 2641695 enh4960
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs548534461[chr19:2639720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2639699 2639720 ZNF263 JASPAR yes 112087661
chr19 2639702 2639723 ZNF263 JASPAR yes 112087663
chr19 2639703 2639724 ZNF263 JASPAR yes 112087665
chr19 2639705 2639726 ZNF263 JASPAR yes 112087669
chr19 2639706 2639727 ZNF263 JASPAR yes 112087671
chr19 2639707 2639728 ZNF263 JASPAR yes 112087672
chr19 2639708 2639722 PLAG1 JASPAR yes 112087673
chr19 2639708 2639729 ZNF263 JASPAR yes 112087674
chr19 2639710 2639720 SP1 JASPAR yes 112087675
chr19 2639710 2639731 ZNF263 JASPAR yes 112087676
chr19 2639711 2639732 ZNF263 JASPAR yes 112087677
chr19 2639714 2639735 ZNF263 JASPAR yes 112087679
chr19 2639715 2639736 ZNF263 JASPAR yes 112087680
chr19 2639717 2639723 MAZ TRANSFAC yes 112087681
chr19 2639717 2639728 E2F6 JASPAR yes 112087682
chr19 2639719 2639740 ZNF263 JASPAR yes 112087683
chr19 2639720 2639741 ZNF263 JASPAR yes 112087684
Genes associated with rs548534461[chr19:2639720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More