EnhancerDB
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  3. rs548540246[chr6:42294522]
Enhancers that have rs548540246[chr6:42294522]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 42275585 42296471 enh9113
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Lung (A549) Stomach Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs548540246[chr6:42294522]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 42294517 42294529 TAL1 JASPAR yes 101709324
chr6 42294519 42294529 FIGLA JASPAR yes 101709325
chr6 42294519 42294529 MSC JASPAR yes 101709326
chr6 42294519 42294529 MYF6 JASPAR yes 101709327
chr6 42294519 42294529 TFAP4 JASPAR yes 101709328
chr6 42294519 42294531 TAL1 JASPAR yes 101709329
chr6 42294520 42294533 SCRT2 JASPAR yes 101709330
Genes associated with rs548540246[chr6:42294522], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More