EnhancerDB
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  3. rs548548748[chr19:5969730]
Enhancers that have rs548548748[chr19:5969730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs548548748[chr19:5969730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5967017 5970257 ZNF274 GTRD no Bone Marrow (K562) 21843756
chr19 5967017 5970257 ZNF274 GTRD no Bone Marrow (K562) 108376111
chr19 5967017 5970257 ZNF274 GTRD no Bone Marrow (K562) 108376112
chr19 5967727 5970096 ZNF274 GTRD no Liver (HepG2) 21843775
chr19 5967727 5970096 ZNF274 GTRD no Liver (HepG2) 108376159
chr19 5967727 5970096 ZNF274 GTRD no Liver (HepG2) 108376160
chr19 5969721 5969736 TFAP2A JASPAR yes 112249717
chr19 5969721 5969736 TFAP2C JASPAR yes 112249718
chr19 5969723 5969735 TFAP2A JASPAR yes 112249719
chr19 5969723 5969735 TFAP2B JASPAR yes 112249720
chr19 5969723 5969735 TFAP2C JASPAR yes 112249721
chr19 5969723 5969738 TFAP2A JASPAR yes 112249722
chr19 5969723 5969738 TFAP2C JASPAR yes 112249723
chr19 5969724 5969735 TFAP2A JASPAR yes 112249724
chr19 5969724 5969735 TFAP2B JASPAR yes 112249725
chr19 5969724 5969735 TFAP2C JASPAR yes 112249726
chr19 5969725 5969734 TFAP2A JASPAR yes 112249727
Genes associated with rs548548748[chr19:5969730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More