EnhancerDB
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  3. rs548552261[chr1:52027986]
Enhancers that have rs548552261[chr1:52027986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs548552261[chr1:52027986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52027976 52027997 ZNF263 JASPAR yes 28850970
chr1 52027978 52027993 PRDM1 JASPAR yes 28850971
chr1 52027982 52028003 ZNF263 JASPAR yes 28850972
Genes associated with rs548552261[chr1:52027986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More